# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN5_microglia_31.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN5_microglia_31.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  157.9  43.32  45.5
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  157.59  43.54  46.2
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  157.69  43.46  45.97
4.3  Radius of line 5 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  157.9  43.32  45.5
4.3  Radius of line 7 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  157.65  43.27  45.02
4.5  Radius of terminal line 8 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  157.9  43.32  45.5
2.4  Seg length ending at pt. 357 >= 6.0 stdevs above mean at 1.37.  (no action taken)
     B1      X, Y, Z:  155.59  32.82  45.46
2.4  Seg length ending at pt. 370 >= 6.0 stdevs above mean at 1.246.  (no action taken)
     B1      X, Y, Z:  155.9  32.17  47.22
2.4  Seg length ending at pt. 543 >= 6.0 stdevs above mean at 1.2661.  (no action taken)
     B1      X, Y, Z:  157.8  43.84  44.35
2.4  Seg length ending at pt. 875 >= 6.0 stdevs above mean at 1.2659.  (no action taken)
     B1      X, Y, Z:  157.19  43.96  47.02
2.7  Line 8 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  157.9  43.32  45.5
2.6  Line 1 and line 5 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  157.9  43.32  45.5
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 11
Number of type B2 irregularities = 0
Number of type C irregularities = 0
