# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN5_microglia_27.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN5_microglia_27.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  128.14  42.81  41.57
4.3  Radius of line 2 at 3.036 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  128.58  43.02  41.43
4.3  Radius of line 3 at 2.865 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  128.93  43.27  41.37
4.5  Radius of terminal line 2041 at 0.219 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  125.64  41.76  34.55
2.4  Seg length ending at pt. 201 >= 6.0 stdevs above mean at 1.2005.  (no action taken)
     B1      X, Y, Z:  124.43  47.5  35.7
2.4  Seg length ending at pt. 381 >= 6.0 stdevs above mean at 1.0701.  (no action taken)
     B1      X, Y, Z:  125.3  54.04  21.74
2.5  Seg length ending at pt. 1231 <= 0.1 at 0.0866.  (removed)
     A       X, Y, Z:  137.85  44.67  44.11
2.5  Seg length ending at pt. 1254 <= 0.1 at 0.0748.  (removed)
     A       X, Y, Z:  137.96  44.7  44.03
2.4  Seg length ending at pt. 1274 >= 6.0 stdevs above mean at 1.0818.  (no action taken)
     B1      X, Y, Z:  138.39  44.8  42.88
2.1  Line 1230 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  137.78  44.62  44.12
 
 


Number of type A irregularities = 2
Number of type B1 irregularities = 8
Number of type B2 irregularities = 0
Number of type C irregularities = 0
