# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN5_microglia_25.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN5_microglia_25.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  201.9  240.8  38.54
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  201.9  240.8  38.54
4.3  Radius of line 5 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  202.15  241.15  38.35
4.5  Radius of terminal line 6 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  201.9  240.8  38.54
2.5  Seg length ending at pt. 1637 <= 0.1 at 0.08.  (removed)
     A       X, Y, Z:  206.9  220.19  42.07
2.7  Line 6 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  201.9  240.8  38.54
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  201.9  240.8  38.54
2.6  Line 1184 and line 1228 have the same coordinates.  Radii do not match.  (no action taken)
     B1      X, Y, Z:  202.0  231.59  36.07
 
 


Number of type A irregularities = 2
Number of type B1 irregularities = 6
Number of type B2 irregularities = 0
Number of type C irregularities = 0
