# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN5_microglia_23.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN5_microglia_23.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  97.65  206.19  37.75
4.3  Radius of line 2 at 3.169 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  97.85  206.09  37.93
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  97.65  206.19  37.75
4.5  Radius of terminal line 501 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  97.65  206.19  37.75
4.3  Radius of line 502 at 3.057 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  97.51  205.59  37.46
2.4  Seg length ending at pt. 4 >= 6.0 stdevs above mean at 2.6161.  (no action taken)
     B1      X, Y, Z:  97.46  205.19  35.34
2.4  Seg length ending at pt. 501 >= 6.0 stdevs above mean at 1.5939.  (no action taken)
     B1      X, Y, Z:  97.65  206.19  37.75
2.5  Seg length ending at pt. 1068 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  96.57  202.07  34.4
2.5  Seg length ending at pt. 1549 <= 0.1 at 0.0964.  (removed)
     A       X, Y, Z:  114.5  198.3  35.47
2.4  Seg length ending at pt. 2023 >= 6.0 stdevs above mean at 1.1946.  (no action taken)
     B1      X, Y, Z:  99.06  210.3  43.29
2.4  Seg length ending at pt. 2062 >= 6.0 stdevs above mean at 1.1794.  (no action taken)
     B1      X, Y, Z:  97.26  210.0  50.38
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  97.65  206.19  37.75
2.6  Line 1 and line 501 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  97.65  206.19  37.75
2.6  Line 3 and line 501 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  97.65  206.19  37.75
2.1  Line 1067 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  96.56  202.15  34.45
 
 


Number of type A irregularities = 2
Number of type B1 irregularities = 13
Number of type B2 irregularities = 0
Number of type C irregularities = 0
