# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN4_microglia_20.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN4_microglia_20.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  280.39  2.55  27.87
4.5  Radius of terminal line 8 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  280.39  2.55  27.87
2.5  Seg length ending at pt. 3 <= 0.1 at 0.0866.  (removed)
     A       X, Y, Z:  280.62  2.68  27.84
2.4  Seg length ending at pt. 656 >= 6.0 stdevs above mean at 1.3636.  (no action taken)
     B1      X, Y, Z:  279.8  2.09  26.73
2.4  Seg length ending at pt. 686 >= 6.0 stdevs above mean at 1.2373.  (no action taken)
     B1      X, Y, Z:  280.6  3.03  25.55
2.7  Line 8 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  280.39  2.55  27.87
2.6  Line 1 and line 5 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  280.39  2.55  27.87
2.1  Line 2 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  280.69  2.73  27.83
 
 


Number of type A irregularities = 2
Number of type B1 irregularities = 6
Number of type B2 irregularities = 0
Number of type C irregularities = 0
