# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN4_microglia_16.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN4_microglia_16.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  200.8  75.46  32.5
4.3  Radius of line 2 at 3.192 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  200.59  75.18  32.46
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  200.8  75.46  32.5
4.3  Radius of line 24 at 3.064 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  200.4  74.95  32.35
4.3  Radius of line 25 at 2.965 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  200.09  74.81  32.17
4.3  Radius of line 26 at 2.884 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  199.8  74.71  31.98
4.3  Radius of line 27 at 2.814 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  199.59  74.62  31.78
4.3  Radius of line 28 at 2.751 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  199.4  74.51  31.6
4.3  Radius of line 29 at 2.692 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  199.09  74.39  31.39
4.5  Radius of terminal line 1513 at 0.206 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  191.69  77.84  27.37
2.5  Seg length ending at pt. 107 <= 0.1 at 0.0671.  (removed)
     A       X, Y, Z:  193.87  77.15  33.98
2.4  Seg length ending at pt. 110 >= 6.0 stdevs above mean at 1.2299.  (no action taken)
     B1      X, Y, Z:  193.69  77.29  35.39
2.4  Seg length ending at pt. 127 >= 6.0 stdevs above mean at 1.1826.  (no action taken)
     B1      X, Y, Z:  193.5  77.23  35.03
2.4  Seg length ending at pt. 1237 >= 6.0 stdevs above mean at 1.1766.  (no action taken)
     B1      X, Y, Z:  197.59  90.6  34.17
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  200.8  75.46  32.5
2.1  Line 106 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  193.9  77.15  33.92
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 15
Number of type B2 irregularities = 0
Number of type C irregularities = 0
