# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN3_microglia_7.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN3_microglia_7.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  100.4  117.0  34.14
4.3  Radius of line 2 at 3.17 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  100.0  116.79  34.28
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  100.4  117.0  34.14
4.5  Radius of terminal line 2951 at 0.166 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  84.92  106.2  28.44
2.5  Seg length ending at pt. 6 <= 0.1 at 0.0768.  (removed)
     A       X, Y, Z:  100.76  116.37  33.08
2.4  Seg length ending at pt. 376 >= 6.0 stdevs above mean at 2.7952.  (no action taken)
     B1      X, Y, Z:  100.4  116.4  35.78
2.4  Seg length ending at pt. 377 >= 6.0 stdevs above mean at 1.3596.  (no action taken)
     B1      X, Y, Z:  100.09  116.5  37.1
2.4  Seg length ending at pt. 956 >= 6.0 stdevs above mean at 1.129.  (no action taken)
     B1      X, Y, Z:  96.23  102.5  16.8
2.4  Seg length ending at pt. 1625 >= 6.0 stdevs above mean at 1.5324.  (no action taken)
     B1      X, Y, Z:  101.09  116.2  35.59
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  100.4  117.0  34.14
2.1  Line 5 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  100.75  116.4  33.15
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 10
Number of type B2 irregularities = 0
Number of type C irregularities = 0
