# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN3_microglia_49.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN3_microglia_49.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  47.89  115.09  29.6
4.3  Radius of line 2 at 3.203 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  48.1  114.9  29.44
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  47.99  115.0  29.52
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  47.89  115.09  29.6
4.3  Radius of line 5 at 3.007 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  47.6  115.59  28.96
4.3  Radius of line 385 at 2.868 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  47.36  115.9  28.64
4.3  Radius of line 1116 at 3.083 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  48.15  114.59  29.3
4.3  Radius of line 1117 at 2.978 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  48.07  114.2  29.21
4.3  Radius of line 1118 at 2.885 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  48.0  113.79  29.14
4.3  Radius of line 1368 at 2.804 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  48.04  113.4  29.12
4.5  Radius of terminal line 4047 at 0.233 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  52.54  104.9  30.91
2.4  Seg length ending at pt. 269 >= 6.0 stdevs above mean at 1.0852.  (no action taken)
     B1      X, Y, Z:  51.52  132.09  23.92
2.5  Seg length ending at pt. 463 <= 0.1 at 0.0574.  (removed)
     A       X, Y, Z:  47.12  123.54  21.02
2.4  Seg length ending at pt. 1647 >= 6.0 stdevs above mean at 1.2165.  (no action taken)
     B1      X, Y, Z:  43.46  98.81  39.57
2.4  Seg length ending at pt. 1744 >= 6.0 stdevs above mean at 1.1256.  (no action taken)
     B1      X, Y, Z:  49.4  108.59  37.29
2.4  Seg length ending at pt. 2091 >= 6.0 stdevs above mean at 1.067.  (no action taken)
     B1      X, Y, Z:  51.93  118.0  47.06
2.4  Seg length ending at pt. 2221 >= 6.0 stdevs above mean at 1.2832.  (no action taken)
     B1      X, Y, Z:  47.09  120.59  44.28
2.4  Seg length ending at pt. 2429 >= 6.0 stdevs above mean at 1.1708.  (no action taken)
     B1      X, Y, Z:  37.93  138.19  42.57
2.4  Seg length ending at pt. 4037 >= 6.0 stdevs above mean at 1.0629.  (no action taken)
     B1      X, Y, Z:  53.0  106.5  31.51
2.6  Line 1 and line 4 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  47.89  115.09  29.6
2.1  Line 462 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  47.16  123.5  21.01
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 20
Number of type B2 irregularities = 0
Number of type C irregularities = 0
