# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN3_microglia_39.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN3_microglia_39.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  150.9  227.69  49.36
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  150.81  227.35  48.99
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  150.82  227.4  49.04
4.3  Radius of line 5 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  150.85  227.5  49.15
4.3  Radius of line 6 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  150.9  227.69  49.36
4.5  Radius of terminal line 2371 at 0.157 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  129.3  236.3  28.51
2.5  Seg length ending at pt. 3 <= 0.1 at 0.0787.  (removed)
     A       X, Y, Z:  150.81  227.35  48.99
2.4  Seg length ending at pt. 1003 >= 6.0 stdevs above mean at 1.3108.  (no action taken)
     B1      X, Y, Z:  150.09  223.69  36.46
2.5  Seg length ending at pt. 1323 <= 0.1 at 0.0922.  (removed)
     A       X, Y, Z:  133.77  231.8  14.35
2.4  Seg length ending at pt. 2207 >= 6.0 stdevs above mean at 1.0905.  (no action taken)
     B1      X, Y, Z:  129.19  235.3  13.97
2.6  Line 1 and line 6 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  150.9  227.69  49.36
2.6  Line 986 and line 995 have the same coordinates.  Radii do not match.  (no action taken)
     B1      X, Y, Z:  149.9  222.4  38.25
2.1  Line 2 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  150.8  227.3  48.93
2.1  Line 1322 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  133.84  231.8  14.41
 
 


Number of type A irregularities = 2
Number of type B1 irregularities = 12
Number of type B2 irregularities = 0
Number of type C irregularities = 0
