# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN3_microglia_28.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN3_microglia_28.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  201.69  283.89  5.81
4.3  Radius of line 936 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  201.69  283.89  5.81
4.5  Radius of terminal line 938 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  201.69  283.89  5.81
4.3  Radius of line 1246 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  201.69  283.89  5.81
4.5  Radius of terminal line 1248 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  201.69  283.89  5.81
2.4  Seg length ending at pt. 115 >= 6.0 stdevs above mean at 1.0787.  (no action taken)
     B1      X, Y, Z:  202.8  267.8  12.25
2.4  Seg length ending at pt. 395 >= 6.0 stdevs above mean at 1.054.  (no action taken)
     B1      X, Y, Z:  218.69  293.6  16.28
2.5  Seg length ending at pt. 426 <= 0.1 at 0.0728.  (removed)
     A       X, Y, Z:  216.9  295.6  11.09
2.5  Seg length ending at pt. 1246 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  201.69  283.89  5.81
2.4  Seg length ending at pt. 1658 >= 6.0 stdevs above mean at 1.0548.  (no action taken)
     B1      X, Y, Z:  190.69  271.8  30.82
2.7  Line 938 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  201.69  283.89  5.81
2.7  Line 1248 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  201.69  283.89  5.81
2.6  Line 1 and line 936 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  201.69  283.89  5.81
 
 


Number of type A irregularities = 4
Number of type B1 irregularities = 9
Number of type B2 irregularities = 0
Number of type C irregularities = 0
