# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN3_microglia_14.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN3_microglia_14.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  259.89  89.64  11.5
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  259.79  89.55  11.16
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  259.89  89.64  11.5
4.3  Radius of line 7 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  260.19  89.46  12.08
4.5  Radius of terminal line 8 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  259.89  89.64  11.5
4.5  Radius of terminal line 1969 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  259.89  89.64  11.5
2.4  Seg length ending at pt. 686 >= 6.0 stdevs above mean at 1.1919.  (no action taken)
     B1      X, Y, Z:  271.69  85.34  29.14
2.7  Line 8 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  259.89  89.64  11.5
2.7  Line 1969 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  259.89  89.64  11.5
2.6  Line 1 and line 4 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  259.89  89.64  11.5
2.6  Line 5 and line 7 have the same coordinates.  Radii do not match.  (no action taken)
     B1      X, Y, Z:  260.19  89.46  12.08
 
 


Number of type A irregularities = 2
Number of type B1 irregularities = 9
Number of type B2 irregularities = 0
Number of type C irregularities = 0
