# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN2_microglia_5.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN2_microglia_5.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  43.1  98.89  16.42
4.5  Radius of terminal line 1484 at 0.154 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  0.25  0.42  0.64
2.5  Seg length ending at pt. 785 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  49.24  101.14  27.85
2.5  Seg length ending at pt. 866 <= 0.1 at 0.0866.  (removed)
     A       X, Y, Z:  54.81  95.14  21.01
2.6  Line 1 and line 4 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  43.1  98.89  16.42
2.1  Line 784 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  49.17  101.19  27.81
2.1  Line 865 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  54.82  95.19  21.08
 
 


Number of type A irregularities = 2
Number of type B1 irregularities = 5
Number of type B2 irregularities = 0
Number of type C irregularities = 0
