# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN2_microglia_19.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN2_microglia_19.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  55.6  217.69  29.87
4.3  Radius of line 2 at 2.939 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  55.92  218.0  29.46
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  55.84  217.92  29.57
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  55.76  217.84  29.67
4.3  Radius of line 5 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  55.6  217.69  29.87
4.5  Radius of terminal line 1709 at 0.173 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  54.21  233.9  36.46
2.4  Seg length ending at pt. 106 >= 6.0 stdevs above mean at 1.2819.  (no action taken)
     B1      X, Y, Z:  55.21  210.0  18.32
2.5  Seg length ending at pt. 782 <= 0.1 at 0.064.  (removed)
     A       X, Y, Z:  55.06  223.64  41.96
2.4  Seg length ending at pt. 794 >= 6.0 stdevs above mean at 3.3719.  (no action taken)
     B1      X, Y, Z:  54.85  223.8  42.54
2.4  Seg length ending at pt. 1659 >= 6.0 stdevs above mean at 1.3005.  (no action taken)
     B1      X, Y, Z:  48.39  246.9  45.53
2.6  Line 1 and line 5 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  55.6  217.69  29.87
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 10
Number of type B2 irregularities = 0
Number of type C irregularities = 0
