# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN2_microglia_12.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN2_microglia_12.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  139.0  122.29  44.5
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  138.62  122.45  44.34
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  138.75  122.4  44.39
4.3  Radius of line 5 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  139.0  122.29  44.5
4.5  Radius of terminal line 1692 at 0.188 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  135.9  124.0  26.32
2.4  Seg length ending at pt. 328 >= 6.0 stdevs above mean at 1.2635.  (no action taken)
     B1      X, Y, Z:  142.3  98.35  28.91
2.5  Seg length ending at pt. 442 <= 0.1 at 0.0964.  (removed)
     A       X, Y, Z:  143.42  98.21  42.62
2.6  Line 1 and line 5 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  139.0  122.29  44.5
2.1  Line 441 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  143.44  98.29  42.57
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 8
Number of type B2 irregularities = 0
Number of type C irregularities = 0
