# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN28_microglia1.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN28_microglia1.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  294.52  152.55  10.61
4.3  Radius of line 851 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  294.52  152.55  10.61
4.3  Radius of line 1667 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  294.52  152.55  10.61
4.3  Radius of line 2052 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  294.52  152.55  10.61
4.5  Radius of terminal line 2270 at 0.16 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  294.76  137.4  7.04
2.5  Seg length ending at pt. 4 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  294.52  152.55  10.61
2.4  Seg length ending at pt. 254 >= 6.0 stdevs above mean at 1.052.  (no action taken)
     B1      X, Y, Z:  291.74  152.96  36.34
2.4  Seg length ending at pt. 818 >= 6.0 stdevs above mean at 1.1542.  (no action taken)
     B1      X, Y, Z:  289.05  150.16  22.26
2.5  Seg length ending at pt. 851 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  294.52  152.55  10.61
2.5  Seg length ending at pt. 1335 <= 0.1 at 0.0632.  (removed)
     A       X, Y, Z:  269.98  175.5  15.24
2.5  Seg length ending at pt. 1667 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  294.52  152.55  10.61
2.4  Seg length ending at pt. 1668 >= 6.0 stdevs above mean at 1.1213.  (no action taken)
     B1      X, Y, Z:  294.85  152.61  11.68
2.5  Seg length ending at pt. 2052 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  294.52  152.55  10.61
2.1  Line 1 has 6 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  294.52  152.55  10.61
2.1  Line 1334 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  270.0  175.44  15.24
 
 


Number of type A irregularities = 5
Number of type B1 irregularities = 10
Number of type B2 irregularities = 0
Number of type C irregularities = 0
