# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN27_microglia6.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN27_microglia6.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  130.56  74.96  13.97
4.3  Radius of line 5 at 3.18 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  130.52  75.26  14.33
4.3  Radius of line 6 at 3.015 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  130.34  75.39  14.89
4.3  Radius of line 7 at 2.885 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  130.09  75.31  15.5
4.3  Radius of line 1412 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  130.56  74.96  13.97
4.3  Radius of line 1413 at 2.965 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  131.31  74.65  14.75
4.3  Radius of line 2981 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  130.56  74.96  13.97
4.3  Radius of line 2982 at 3.055 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  130.9  75.43  13.89
4.3  Radius of line 2983 at 2.92 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  130.99  75.62  13.83
4.3  Radius of line 2984 at 2.92 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  131.08  75.79  13.78
4.3  Radius of line 4312 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  130.56  74.96  13.97
4.3  Radius of line 4313 at 2.99 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  130.0  75.23  13.89
4.3  Radius of line 4497 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  130.56  74.96  13.97
4.5  Radius of terminal line 4523 at 0.185 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  130.97  74.98  30.14
2.5  Seg length ending at pt. 4 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  130.56  74.96  13.97
2.4  Seg length ending at pt. 288 >= 6.0 stdevs above mean at 1.1626.  (no action taken)
     B1      X, Y, Z:  105.79  60.03  26.17
2.5  Seg length ending at pt. 1412 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  130.56  74.96  13.97
2.4  Seg length ending at pt. 1578 >= 6.0 stdevs above mean at 1.1828.  (no action taken)
     B1      X, Y, Z:  116.75  54.65  24.96
2.5  Seg length ending at pt. 2396 <= 0.1 at 0.0927.  (removed)
     A       X, Y, Z:  133.0  86.77  45.24
2.5  Seg length ending at pt. 2981 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  130.56  74.96  13.97
2.4  Seg length ending at pt. 3450 >= 6.0 stdevs above mean at 1.2083.  (no action taken)
     B1      X, Y, Z:  128.93  87.23  24.3
2.5  Seg length ending at pt. 4312 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  130.56  74.96  13.97
2.5  Seg length ending at pt. 4497 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  130.56  74.96  13.97
2.4  Seg length ending at pt. 4498 >= 6.0 stdevs above mean at 1.6946.  (no action taken)
     B1      X, Y, Z:  131.03  75.31  15.56
2.4  Seg length ending at pt. 4499 >= 6.0 stdevs above mean at 1.2587.  (no action taken)
     B1      X, Y, Z:  131.21  75.43  16.8
2.1  Line 1 has 7 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  130.56  74.96  13.97
2.1  Line 2395 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  133.06  86.78  45.17
 
 


Number of type A irregularities = 6
Number of type B1 irregularities = 21
Number of type B2 irregularities = 0
Number of type C irregularities = 0
