# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN27_microglia28.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN27_microglia28.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  196.5  91.98  37.93
4.3  Radius of line 5 at 3.15 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  196.68  91.93  38.17
4.3  Radius of line 986 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  196.5  91.98  37.93
4.3  Radius of line 1414 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  196.5  91.98  37.93
4.3  Radius of line 1994 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  196.5  91.98  37.93
4.5  Radius of terminal line 2535 at 0.155 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  204.69  78.59  33.14
2.5  Seg length ending at pt. 4 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  196.5  91.98  37.93
2.5  Seg length ending at pt. 252 <= 0.1 at 0.0678.  (removed)
     A       X, Y, Z:  222.58  103.46  46.67
2.5  Seg length ending at pt. 986 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  196.5  91.98  37.93
2.4  Seg length ending at pt. 1103 >= 6.0 stdevs above mean at 1.2603.  (no action taken)
     B1      X, Y, Z:  207.27  103.62  45.24
2.5  Seg length ending at pt. 1414 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  196.5  91.98  37.93
2.4  Seg length ending at pt. 1415 >= 6.0 stdevs above mean at 2.1911.  (no action taken)
     B1      X, Y, Z:  195.88  91.68  35.85
2.4  Seg length ending at pt. 1416 >= 6.0 stdevs above mean at 1.3736.  (no action taken)
     B1      X, Y, Z:  195.5  91.67  34.53
2.5  Seg length ending at pt. 1994 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  196.5  91.98  37.93
2.4  Seg length ending at pt. 2355 >= 6.0 stdevs above mean at 2.271.  (no action taken)
     B1      X, Y, Z:  196.25  92.4  39.29
2.4  Seg length ending at pt. 2356 >= 6.0 stdevs above mean at 1.3678.  (no action taken)
     B1      X, Y, Z:  196.25  92.62  40.64
2.1  Line 1 has 6 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  196.5  91.98  37.93
2.1  Line 251 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  222.59  103.4  46.7
 
 


Number of type A irregularities = 5
Number of type B1 irregularities = 13
Number of type B2 irregularities = 0
Number of type C irregularities = 0
