# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN27_microglia27.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN27_microglia27.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  201.68  51.46  38.74
4.3  Radius of line 5 at 3.19 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  201.37  51.4  38.82
4.3  Radius of line 6 at 3.045 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  201.36  51.4  38.84
4.3  Radius of line 7 at 3.045 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  201.34  51.39  38.85
4.3  Radius of line 8 at 3.045 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  201.3  51.38  38.87
4.3  Radius of line 9 at 3.045 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  201.23  51.35  38.92
4.3  Radius of line 10 at 3.045 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  201.09  51.31  39.0
4.3  Radius of line 11 at 2.94 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  200.8  51.14  39.14
4.3  Radius of line 12 at 2.845 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  200.47  50.97  39.17
4.3  Radius of line 3773 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  201.68  51.46  38.74
4.5  Radius of terminal line 3881 at 0.215 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  201.52  46.39  29.01
2.5  Seg length ending at pt. 4 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  201.68  51.46  38.74
2.5  Seg length ending at pt. 6 <= 0.1 at 0.0224.  (removed)
     A       X, Y, Z:  201.36  51.4  38.84
2.5  Seg length ending at pt. 8 <= 0.1 at 0.0458.  (removed)
     A       X, Y, Z:  201.3  51.38  38.87
2.4  Seg length ending at pt. 1970 >= 6.0 stdevs above mean at 1.1047.  (no action taken)
     B1      X, Y, Z:  200.87  54.65  49.17
2.4  Seg length ending at pt. 2190 >= 6.0 stdevs above mean at 1.4306.  (no action taken)
     B1      X, Y, Z:  202.09  52.14  37.89
2.4  Seg length ending at pt. 3503 >= 6.0 stdevs above mean at 1.1592.  (no action taken)
     B1      X, Y, Z:  207.62  59.32  20.82
2.5  Seg length ending at pt. 3773 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  201.68  51.46  38.74
2.4  Seg length ending at pt. 3774 >= 6.0 stdevs above mean at 1.5581.  (no action taken)
     B1      X, Y, Z:  202.4  51.39  37.36
2.5  Seg length ending at pt. 7 <= 0.1 at 0.0436.  (removed)
     A       X, Y, Z:  201.34  51.39  38.85
2.1  Line 1 has 4 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  201.68  51.46  38.74
2.1  Line 5 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  201.37  51.4  38.82
 
 


Number of type A irregularities = 5
Number of type B1 irregularities = 17
Number of type B2 irregularities = 0
Number of type C irregularities = 0
