# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN27_microglia20.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN27_microglia20.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  237.05  181.03  25.96
4.3  Radius of line 5 at 2.985 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  237.46  181.12  25.37
4.3  Radius of line 6 at 2.825 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  237.68  181.1  25.19
4.3  Radius of line 7 at 2.825 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  237.88  181.09  25.01
4.3  Radius of line 1941 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  237.05  181.03  25.96
4.3  Radius of line 1942 at 3.05 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  236.59  180.63  25.71
4.3  Radius of line 1943 at 2.92 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  236.43  180.51  25.64
4.3  Radius of line 1944 at 2.92 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  236.27  180.38  25.57
4.3  Radius of line 1945 at 2.84 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  235.97  180.31  25.48
4.3  Radius of line 4256 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  237.05  181.03  25.96
4.3  Radius of line 4294 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  237.05  181.03  25.96
4.5  Radius of terminal line 4302 at 0.31 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  237.46  179.81  32.67
2.5  Seg length ending at pt. 4 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  237.05  181.03  25.96
2.4  Seg length ending at pt. 1926 >= 6.0 stdevs above mean at 1.3484.  (no action taken)
     B1      X, Y, Z:  239.34  183.86  41.54
2.5  Seg length ending at pt. 1941 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  237.05  181.03  25.96
2.4  Seg length ending at pt. 2069 >= 6.0 stdevs above mean at 1.2283.  (no action taken)
     B1      X, Y, Z:  220.3  178.97  28.44
2.4  Seg length ending at pt. 3200 >= 6.0 stdevs above mean at 1.2337.  (no action taken)
     B1      X, Y, Z:  215.59  187.43  29.66
2.5  Seg length ending at pt. 3672 <= 0.1 at 0.0866.  (removed)
     A       X, Y, Z:  234.03  188.28  41.16
2.5  Seg length ending at pt. 4256 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  237.05  181.03  25.96
2.4  Seg length ending at pt. 4257 >= 6.0 stdevs above mean at 1.3343.  (no action taken)
     B1      X, Y, Z:  237.75  181.53  24.94
2.5  Seg length ending at pt. 4294 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  237.05  181.03  25.96
2.4  Seg length ending at pt. 4295 >= 6.0 stdevs above mean at 1.467.  (no action taken)
     B1      X, Y, Z:  237.12  180.71  27.39
2.1  Line 1 has 6 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  237.05  181.03  25.96
2.1  Line 3671 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  234.02  188.21  41.11
 
 


Number of type A irregularities = 5
Number of type B1 irregularities = 19
Number of type B2 irregularities = 0
Number of type C irregularities = 0
