# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN27_microglia11.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN27_microglia11.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  190.75  255.13  18.94
4.3  Radius of line 5 at 3.175 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  191.33  255.36  18.78
4.3  Radius of line 2155 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  190.75  255.13  18.94
4.3  Radius of line 2353 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  190.75  255.13  18.94
4.5  Radius of terminal line 2896 at 0.21 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  190.62  249.22  23.87
2.5  Seg length ending at pt. 4 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  190.75  255.13  18.94
2.5  Seg length ending at pt. 507 <= 0.1 at 0.0949.  (removed)
     A       X, Y, Z:  188.24  235.62  21.89
2.4  Seg length ending at pt. 1019 >= 6.0 stdevs above mean at 1.2766.  (no action taken)
     B1      X, Y, Z:  198.0  244.94  32.4
2.5  Seg length ending at pt. 1073 <= 0.1 at 0.0632.  (removed)
     A       X, Y, Z:  192.84  258.19  27.11
2.4  Seg length ending at pt. 1465 >= 6.0 stdevs above mean at 1.1725.  (no action taken)
     B1      X, Y, Z:  191.09  254.5  42.47
2.4  Seg length ending at pt. 1536 >= 6.0 stdevs above mean at 1.1898.  (no action taken)
     B1      X, Y, Z:  194.69  257.48  36.5
2.4  Seg length ending at pt. 1708 >= 6.0 stdevs above mean at 1.2748.  (no action taken)
     B1      X, Y, Z:  198.24  257.75  40.34
2.4  Seg length ending at pt. 1791 >= 6.0 stdevs above mean at 1.6734.  (no action taken)
     B1      X, Y, Z:  190.81  256.35  17.17
2.5  Seg length ending at pt. 2155 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  190.75  255.13  18.94
2.5  Seg length ending at pt. 2353 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  190.75  255.13  18.94
2.1  Line 1 has 5 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  190.75  255.13  18.94
2.1  Line 1072 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  192.84  258.17  27.05
 
 


Number of type A irregularities = 5
Number of type B1 irregularities = 12
Number of type B2 irregularities = 0
Number of type C irregularities = 0
