# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN26_microglia4.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN26_microglia4.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  172.88  207.68  8.42
4.3  Radius of line 46 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  172.88  207.68  8.42
4.3  Radius of line 47 at 2.915 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  173.5  207.86  9.72
4.3  Radius of line 48 at 2.745 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  173.9  207.87  10.58
4.3  Radius of line 49 at 2.645 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  174.24  207.81  11.16
4.3  Radius of line 50 at 2.565 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  174.56  207.84  11.71
4.3  Radius of line 1576 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  172.88  207.68  8.42
4.3  Radius of line 1577 at 2.96 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  172.59  207.71  9.48
4.3  Radius of line 1578 at 2.82 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  172.22  207.56  9.99
4.3  Radius of line 1579 at 2.735 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  171.81  207.41  10.1
4.3  Radius of line 1580 at 2.66 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  171.37  207.33  10.1
4.3  Radius of line 1581 at 2.595 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  170.97  207.19  10.16
4.3  Radius of line 2896 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  172.88  207.68  8.42
4.5  Radius of terminal line 2918 at 0.205 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  172.06  204.12  21.1
2.5  Seg length ending at pt. 4 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  172.88  207.68  8.42
2.5  Seg length ending at pt. 46 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  172.88  207.68  8.42
2.4  Seg length ending at pt. 47 >= 6.0 stdevs above mean at 1.4515.  (no action taken)
     B1      X, Y, Z:  173.5  207.86  9.72
2.5  Seg length ending at pt. 140 <= 0.1 at 0.0849.  (removed)
     A       X, Y, Z:  188.71  212.62  38.44
2.5  Seg length ending at pt. 576 <= 0.1 at 0.0866.  (removed)
     A       X, Y, Z:  183.28  199.56  20.71
2.5  Seg length ending at pt. 1443 <= 0.1 at 0.0806.  (removed)
     A       X, Y, Z:  189.81  213.24  14.96
2.5  Seg length ending at pt. 1576 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  172.88  207.68  8.42
2.4  Seg length ending at pt. 2122 >= 6.0 stdevs above mean at 1.3002.  (no action taken)
     B1      X, Y, Z:  150.69  204.4  7.25
2.5  Seg length ending at pt. 2272 <= 0.1 at 0.0985.  (removed)
     A       X, Y, Z:  145.12  200.06  15.08
2.5  Seg length ending at pt. 2896 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  172.88  207.68  8.42
2.4  Seg length ending at pt. 2897 >= 6.0 stdevs above mean at 1.8624.  (no action taken)
     B1      X, Y, Z:  172.91  207.77  10.28
2.4  Seg length ending at pt. 2898 >= 6.0 stdevs above mean at 1.1762.  (no action taken)
     B1      X, Y, Z:  172.68  207.68  11.43
2.1  Line 1 has 6 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  172.88  207.68  8.42
2.1  Line 139 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  188.71  212.68  38.38
2.1  Line 575 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  183.29  199.61  20.64
 
 


Number of type A irregularities = 8
Number of type B1 irregularities = 21
Number of type B2 irregularities = 0
Number of type C irregularities = 0
