# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN26_microglia1.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN26_microglia1.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  164.25  19.33  1.03
4.3  Radius of line 384 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  164.25  19.33  1.03
4.3  Radius of line 1302 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  164.25  19.33  1.03
4.5  Radius of terminal line 2157 at 0.23 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  165.5  8.52  7.7
2.5  Seg length ending at pt. 4 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  164.25  19.33  1.03
2.5  Seg length ending at pt. 384 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  164.25  19.33  1.03
2.4  Seg length ending at pt. 385 >= 6.0 stdevs above mean at 1.1721.  (no action taken)
     B1      X, Y, Z:  163.44  19.44  1.87
2.4  Seg length ending at pt. 567 >= 6.0 stdevs above mean at 1.2544.  (no action taken)
     B1      X, Y, Z:  147.81  13.38  36.31
2.4  Seg length ending at pt. 571 >= 6.0 stdevs above mean at 1.2127.  (no action taken)
     B1      X, Y, Z:  159.74  17.78  29.35
2.5  Seg length ending at pt. 1302 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  164.25  19.33  1.03
2.4  Seg length ending at pt. 1442 >= 6.0 stdevs above mean at 1.1535.  (no action taken)
     B1      X, Y, Z:  164.25  3.5  36.81
2.4  Seg length ending at pt. 1960 >= 6.0 stdevs above mean at 1.2573.  (no action taken)
     B1      X, Y, Z:  174.83  1.16  29.23
2.1  Line 1 has 5 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  164.25  19.33  1.03
 
 


Number of type A irregularities = 3
Number of type B1 irregularities = 10
Number of type B2 irregularities = 0
Number of type C irregularities = 0
