# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN24_microglia5.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN24_microglia5.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  22.67  128.34  13.51
4.3  Radius of line 5 at 3.19 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  23.07  128.47  13.85
4.3  Radius of line 3129 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  22.67  128.34  13.51
4.3  Radius of line 3130 at 3.15 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  22.44  127.62  13.58
4.5  Radius of terminal line 4179 at 0.2 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  23.12  124.81  5.71
2.5  Seg length ending at pt. 4 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  22.67  128.34  13.51
2.4  Seg length ending at pt. 1100 >= 6.0 stdevs above mean at 1.0569.  (no action taken)
     B1      X, Y, Z:  33.86  130.96  39.36
2.5  Seg length ending at pt. 1431 <= 0.1 at 0.0728.  (removed)
     A       X, Y, Z:  35.23  136.3  28.12
2.4  Seg length ending at pt. 1890 >= 6.0 stdevs above mean at 1.2679.  (no action taken)
     B1      X, Y, Z:  27.66  115.65  8.26
2.4  Seg length ending at pt. 2139 >= 6.0 stdevs above mean at 0.9682.  (no action taken)
     B1      X, Y, Z:  34.6  130.46  16.08
2.5  Seg length ending at pt. 2801 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  17.8  144.18  28.85
2.5  Seg length ending at pt. 3129 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  22.67  128.34  13.51
2.4  Seg length ending at pt. 3447 >= 6.0 stdevs above mean at 1.0286.  (no action taken)
     B1      X, Y, Z:  5.76  127.28  41.95
2.4  Seg length ending at pt. 3882 >= 6.0 stdevs above mean at 1.0631.  (no action taken)
     B1      X, Y, Z:  10.08  110.6  29.12
2.4  Seg length ending at pt. 4053 >= 6.0 stdevs above mean at 1.2366.  (no action taken)
     B1      X, Y, Z:  22.35  127.23  12.41
2.1  Line 1 has 4 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  22.67  128.34  13.51
2.1  Line 1430 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  35.21  136.37  28.12
 
 


Number of type A irregularities = 4
Number of type B1 irregularities = 13
Number of type B2 irregularities = 0
Number of type C irregularities = 0
