# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN24_microglia41.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN24_microglia41.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  60.67  215.41  25.14
4.3  Radius of line 2 at 2.89 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  60.62  215.45  25.68
4.3  Radius of line 3 at 2.89 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  60.57  215.49  26.23
4.3  Radius of line 295 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  60.67  215.41  25.14
4.3  Radius of line 296 at 2.96 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  60.2  215.59  24.03
4.3  Radius of line 3390 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  60.67  215.41  25.14
4.3  Radius of line 3391 at 2.925 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  60.68  215.84  26.28
4.5  Radius of terminal line 3911 at 0.2 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  61.71  218.83  33.39
2.4  Seg length ending at pt. 296 >= 6.0 stdevs above mean at 1.2188.  (no action taken)
     B1      X, Y, Z:  60.2  215.59  24.03
2.5  Seg length ending at pt. 2175 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  77.59  218.0  23.73
2.4  Seg length ending at pt. 2389 >= 6.0 stdevs above mean at 1.3134.  (no action taken)
     B1      X, Y, Z:  62.4  215.0  16.67
2.4  Seg length ending at pt. 2584 >= 6.0 stdevs above mean at 1.2148.  (no action taken)
     B1      X, Y, Z:  46.09  209.15  21.42
2.5  Seg length ending at pt. 3019 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  54.0  226.94  34.1
2.4  Seg length ending at pt. 3181 >= 6.0 stdevs above mean at 1.117.  (no action taken)
     B1      X, Y, Z:  54.15  226.84  35.14
2.4  Seg length ending at pt. 3253 >= 6.0 stdevs above mean at 1.0627.  (no action taken)
     B1      X, Y, Z:  59.88  215.65  22.92
2.5  Seg length ending at pt. 3390 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  60.67  215.41  25.14
2.4  Seg length ending at pt. 3391 >= 6.0 stdevs above mean at 1.2184.  (no action taken)
     B1      X, Y, Z:  60.68  215.84  26.28
2.6  Line 1 and line 295 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  60.67  215.41  25.14
2.1  Line 3018 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  54.04  226.9  34.03
 
 


Number of type A irregularities = 3
Number of type B1 irregularities = 16
Number of type B2 irregularities = 0
Number of type C irregularities = 0
