# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN24_microglia28.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN24_microglia28.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  59.47  54.89  32.5
4.3  Radius of line 919 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  59.47  54.89  32.5
4.3  Radius of line 2193 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  59.47  54.89  32.5
4.5  Radius of terminal line 3039 at 0.17 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  48.18  56.6  34.4
2.4  Seg length ending at pt. 4 >= 6.0 stdevs above mean at 8.0405.  (no action taken)
     B1      X, Y, Z:  59.47  54.89  32.5
2.4  Seg length ending at pt. 919 >= 6.0 stdevs above mean at 8.0405.  (no action taken)
     B1      X, Y, Z:  59.47  54.89  32.5
2.5  Seg length ending at pt. 1010 <= 0.1 at 0.0424.  (removed)
     A       X, Y, Z:  42.78  40.17  36.71
2.5  Seg length ending at pt. 1012 <= 0.1 at 0.0781.  (removed)
     A       X, Y, Z:  42.78  40.1  36.8
2.4  Seg length ending at pt. 2193 >= 6.0 stdevs above mean at 8.0405.  (no action taken)
     B1      X, Y, Z:  59.47  54.89  32.5
2.5  Seg length ending at pt. 1011 <= 0.1 at 0.0781.  (removed)
     A       X, Y, Z:  42.78  40.15  36.74
2.6  Line 4 and line 920 have the same coordinates.  (second line removed)
     A      X, Y, Z:  59.47  54.89  32.5
2.6  Line 4 and line 2194 have the same coordinates.  (second line removed)
     A      X, Y, Z:  59.47  54.89  32.5
2.1  Line 1 has 5 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  65.4  49.46  32.5
2.1  Line 1009 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  42.78  40.2  36.68
 
 


Number of type A irregularities = 5
Number of type B1 irregularities = 9
Number of type B2 irregularities = 0
Number of type C irregularities = 0
