# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN24_microglia20.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN24_microglia20.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  231.37  98.54  29.69
4.3  Radius of line 811 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  231.37  98.54  29.69
4.3  Radius of line 1039 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  231.37  98.54  29.69
4.3  Radius of line 1944 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  231.37  98.54  29.69
4.3  Radius of line 2784 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  231.37  98.54  29.69
4.5  Radius of terminal line 2802 at 0.225 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  227.02  97.37  36.99
2.5  Seg length ending at pt. 4 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  231.37  98.54  29.69
2.4  Seg length ending at pt. 792 >= 6.0 stdevs above mean at 1.222.  (no action taken)
     B1      X, Y, Z:  232.5  90.81  33.29
2.4  Seg length ending at pt. 798 >= 6.0 stdevs above mean at 1.2068.  (no action taken)
     B1      X, Y, Z:  232.34  91.06  33.29
2.5  Seg length ending at pt. 811 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  231.37  98.54  29.69
2.5  Seg length ending at pt. 1039 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  231.37  98.54  29.69
2.5  Seg length ending at pt. 1944 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  231.37  98.54  29.69
2.4  Seg length ending at pt. 1945 >= 6.0 stdevs above mean at 1.1609.  (no action taken)
     B1      X, Y, Z:  231.46  99.28  28.8
2.4  Seg length ending at pt. 2340 >= 6.0 stdevs above mean at 1.2503.  (no action taken)
     B1      X, Y, Z:  237.09  100.9  13.8
2.4  Seg length ending at pt. 2760 >= 6.0 stdevs above mean at 1.2516.  (no action taken)
     B1      X, Y, Z:  231.78  99.29  30.01
2.5  Seg length ending at pt. 2784 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  231.37  98.54  29.69
2.1  Line 1 has 7 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  231.37  98.54  29.69
 
 


Number of type A irregularities = 5
Number of type B1 irregularities = 12
Number of type B2 irregularities = 0
Number of type C irregularities = 0
