# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN24_microglia16.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN24_microglia16.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  128.59  149.09  22.67
4.3  Radius of line 5 at 3.185 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  128.9  149.15  22.85
4.3  Radius of line 6 at 3.045 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  129.28  149.28  22.89
4.3  Radius of line 766 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  128.59  149.09  22.67
4.3  Radius of line 2315 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  128.59  149.09  22.67
4.3  Radius of line 2316 at 3.155 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  128.84  149.65  22.85
4.3  Radius of line 3618 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  128.59  149.09  22.67
4.3  Radius of line 3619 at 3.095 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  128.06  148.93  23.14
4.3  Radius of line 4852 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  128.59  149.09  22.67
4.3  Radius of line 4853 at 3.1 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  128.49  148.47  23.01
4.5  Radius of terminal line 5465 at 0.21 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  128.38  143.31  15.65
2.5  Seg length ending at pt. 4 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  128.59  149.09  22.67
2.4  Seg length ending at pt. 334 >= 6.0 stdevs above mean at 1.0212.  (no action taken)
     B1      X, Y, Z:  130.84  128.02  20.39
2.4  Seg length ending at pt. 703 >= 6.0 stdevs above mean at 1.0368.  (no action taken)
     B1      X, Y, Z:  134.72  162.5  7.62
2.5  Seg length ending at pt. 766 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  128.59  149.09  22.67
2.4  Seg length ending at pt. 1700 >= 6.0 stdevs above mean at 0.9982.  (no action taken)
     B1      X, Y, Z:  125.51  163.88  32.22
2.4  Seg length ending at pt. 1837 >= 6.0 stdevs above mean at 1.1803.  (no action taken)
     B1      X, Y, Z:  129.65  149.36  27.21
2.4  Seg length ending at pt. 1838 >= 6.0 stdevs above mean at 0.9599.  (no action taken)
     B1      X, Y, Z:  129.59  149.59  28.14
2.5  Seg length ending at pt. 1922 <= 0.1 at 0.0678.  (removed)
     A       X, Y, Z:  141.33  161.93  29.45
2.4  Seg length ending at pt. 2241 >= 6.0 stdevs above mean at 1.097.  (no action taken)
     B1      X, Y, Z:  141.19  157.13  31.21
2.4  Seg length ending at pt. 2277 >= 6.0 stdevs above mean at 0.9878.  (no action taken)
     B1      X, Y, Z:  135.56  153.33  29.1
2.5  Seg length ending at pt. 2315 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  128.59  149.09  22.67
2.5  Seg length ending at pt. 2775 <= 0.1 at 0.0548.  (removed)
     A       X, Y, Z:  114.09  157.81  26.48
2.4  Seg length ending at pt. 3279 >= 6.0 stdevs above mean at 0.9501.  (no action taken)
     B1      X, Y, Z:  125.81  152.96  18.0
2.5  Seg length ending at pt. 3618 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  128.59  149.09  22.67
2.4  Seg length ending at pt. 4175 >= 6.0 stdevs above mean at 0.9623.  (no action taken)
     B1      X, Y, Z:  103.12  158.71  26.96
2.4  Seg length ending at pt. 4182 >= 6.0 stdevs above mean at 1.0517.  (no action taken)
     B1      X, Y, Z:  103.18  158.71  27.05
2.5  Seg length ending at pt. 4852 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  128.59  149.09  22.67
2.5  Seg length ending at pt. 4969 <= 0.1 at 0.0938.  (removed)
     A       X, Y, Z:  120.06  121.28  13.6
2.4  Seg length ending at pt. 5381 >= 6.0 stdevs above mean at 1.2065.  (no action taken)
     B1      X, Y, Z:  125.2  143.27  15.74
2.1  Line 1 has 7 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  128.59  149.09  22.67
2.1  Line 1921 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  141.3  161.87  29.46
2.1  Line 2774 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  114.04  157.8  26.46
2.1  Line 4968 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  120.12  121.34  13.56
 
 


Number of type A irregularities = 8
Number of type B1 irregularities = 26
Number of type B2 irregularities = 0
Number of type C irregularities = 0
