# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN23_microglia39.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN23_microglia39.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  192.65  57.24  22.5
4.3  Radius of line 5 at 3.09 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  192.33  57.52  22.37
4.3  Radius of line 6 at 2.955 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  192.02  57.56  22.25
4.3  Radius of line 7 at 2.85 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  191.71  57.42  22.17
4.3  Radius of line 1826 at 2.79 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  192.36  57.85  22.0
4.3  Radius of line 2637 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  192.65  57.24  22.5
4.3  Radius of line 2638 at 2.995 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  193.28  57.03  22.12
4.3  Radius of line 2639 at 2.83 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  193.68  56.89  21.73
4.3  Radius of line 2782 at 2.83 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  193.37  57.0  22.21
4.5  Radius of terminal line 2925 at 0.225 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  201.81  55.15  36.97
2.5  Seg length ending at pt. 4 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  192.65  57.24  22.5
2.5  Seg length ending at pt. 478 <= 0.1 at 0.0849.  (removed)
     A       X, Y, Z:  182.9  55.75  34.89
2.4  Seg length ending at pt. 795 >= 6.0 stdevs above mean at 1.0584.  (no action taken)
     B1      X, Y, Z:  175.25  40.03  22.17
2.4  Seg length ending at pt. 1532 >= 6.0 stdevs above mean at 1.1204.  (no action taken)
     B1      X, Y, Z:  192.8  41.78  29.32
2.5  Seg length ending at pt. 2321 <= 0.1 at 0.0922.  (removed)
     A       X, Y, Z:  205.37  66.21  23.25
2.4  Seg length ending at pt. 2548 >= 6.0 stdevs above mean at 1.3017.  (no action taken)
     B1      X, Y, Z:  196.68  64.9  24.35
2.5  Seg length ending at pt. 2637 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  192.65  57.24  22.5
2.1  Line 1 has 4 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  192.65  57.24  22.5
2.1  Line 2320 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  205.31  66.21  23.32
 
 


Number of type A irregularities = 4
Number of type B1 irregularities = 15
Number of type B2 irregularities = 0
Number of type C irregularities = 0
