# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN23_microglia2.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN23_microglia2.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  261.51  234.65  7.48
4.3  Radius of line 5 at 3.095 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  261.5  234.24  7.5
4.3  Radius of line 717 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  261.51  234.65  7.48
4.3  Radius of line 1951 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  261.51  234.65  7.48
4.5  Radius of terminal line 2029 at 0.28 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  256.68  228.58  7.19
2.5  Seg length ending at pt. 4 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  261.51  234.65  7.48
2.4  Seg length ending at pt. 361 >= 6.0 stdevs above mean at 1.3186.  (no action taken)
     B1      X, Y, Z:  261.12  233.62  8.6
2.5  Seg length ending at pt. 717 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  261.51  234.65  7.48
2.5  Seg length ending at pt. 1332 <= 0.1 at 0.09.  (removed)
     A       X, Y, Z:  251.18  238.94  7.91
2.5  Seg length ending at pt. 1448 <= 0.1 at 0.099.  (removed)
     A       X, Y, Z:  256.36  255.29  27.32
2.4  Seg length ending at pt. 1489 >= 6.0 stdevs above mean at 1.1201.  (no action taken)
     B1      X, Y, Z:  255.96  255.09  28.26
2.5  Seg length ending at pt. 1951 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  261.51  234.65  7.48
2.1  Line 1 has 5 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  261.51  234.65  7.48
2.1  Line 1447 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  256.37  255.25  27.23
 
 


Number of type A irregularities = 5
Number of type B1 irregularities = 9
Number of type B2 irregularities = 0
Number of type C irregularities = 0
