# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN22_microglia8.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN22_microglia8.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  152.87  162.77  28.08
4.3  Radius of line 591 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  152.87  162.77  28.08
4.3  Radius of line 2726 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  152.87  162.77  28.08
4.3  Radius of line 3112 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  152.87  162.77  28.08
4.5  Radius of terminal line 3131 at 0.22 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  153.46  168.15  32.86
2.5  Seg length ending at pt. 4 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  152.87  162.77  28.08
2.5  Seg length ending at pt. 336 <= 0.1 at 0.0943.  (removed)
     A       X, Y, Z:  160.09  150.77  35.11
2.4  Seg length ending at pt. 579 >= 6.0 stdevs above mean at 1.073.  (no action taken)
     B1      X, Y, Z:  155.25  160.84  33.14
2.5  Seg length ending at pt. 591 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  152.87  162.77  28.08
2.4  Seg length ending at pt. 843 >= 6.0 stdevs above mean at 1.0372.  (no action taken)
     B1      X, Y, Z:  135.09  152.55  34.64
2.4  Seg length ending at pt. 1132 >= 6.0 stdevs above mean at 1.2018.  (no action taken)
     B1      X, Y, Z:  143.25  147.34  38.27
2.4  Seg length ending at pt. 1210 >= 6.0 stdevs above mean at 1.0007.  (no action taken)
     B1      X, Y, Z:  144.18  153.19  34.2
2.4  Seg length ending at pt. 1349 >= 6.0 stdevs above mean at 0.9764.  (no action taken)
     B1      X, Y, Z:  144.31  132.25  32.96
2.5  Seg length ending at pt. 2726 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  152.87  162.77  28.08
2.5  Seg length ending at pt. 3112 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  152.87  162.77  28.08
2.4  Seg length ending at pt. 3113 >= 6.0 stdevs above mean at 1.0482.  (no action taken)
     B1      X, Y, Z:  153.36  163.22  28.89
2.1  Line 1 has 6 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  152.87  162.77  28.08
 
 


Number of type A irregularities = 5
Number of type B1 irregularities = 12
Number of type B2 irregularities = 0
Number of type C irregularities = 0
