# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN22_microglia6.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN22_microglia6.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  207.9  97.84  27.87
4.3  Radius of line 5 at 3.18 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  208.12  97.39  27.94
4.3  Radius of line 2304 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  207.9  97.84  27.87
4.3  Radius of line 2723 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  207.9  97.84  27.87
4.3  Radius of line 2866 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  207.9  97.84  27.87
4.5  Radius of terminal line 3000 at 0.24 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  214.21  88.32  22.44
2.5  Seg length ending at pt. 4 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  207.9  97.84  27.87
2.5  Seg length ending at pt. 61 <= 0.1 at 0.0424.  (removed)
     A       X, Y, Z:  196.77  99.69  32.67
2.5  Seg length ending at pt. 63 <= 0.1 at 0.097.  (removed)
     A       X, Y, Z:  196.72  99.83  32.64
2.4  Seg length ending at pt. 211 >= 6.0 stdevs above mean at 1.0312.  (no action taken)
     B1      X, Y, Z:  184.87  100.31  31.26
2.4  Seg length ending at pt. 2240 >= 6.0 stdevs above mean at 1.0402.  (no action taken)
     B1      X, Y, Z:  208.66  86.5  31.17
2.5  Seg length ending at pt. 2304 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  207.9  97.84  27.87
2.5  Seg length ending at pt. 2723 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  207.9  97.84  27.87
2.5  Seg length ending at pt. 2866 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  207.9  97.84  27.87
2.5  Seg length ending at pt. 62 <= 0.1 at 0.097.  (removed)
     A       X, Y, Z:  196.75  99.74  32.66
2.1  Line 1 has 6 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  207.9  97.84  27.87
2.1  Line 60 has 5 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  196.78  99.65  32.68
 
 


Number of type A irregularities = 7
Number of type B1 irregularities = 10
Number of type B2 irregularities = 0
Number of type C irregularities = 0
