# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN22_microglia4.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN22_microglia4.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  187.99  158.53  25.67
4.3  Radius of line 686 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  187.99  158.53  25.67
4.3  Radius of line 1531 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  187.99  158.53  25.67
4.3  Radius of line 2289 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  187.99  158.53  25.67
4.5  Radius of terminal line 2670 at 0.19 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  189.58  156.56  9.73
2.5  Seg length ending at pt. 4 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  187.99  158.53  25.67
2.4  Seg length ending at pt. 350 >= 6.0 stdevs above mean at 1.122.  (no action taken)
     B1      X, Y, Z:  196.3  181.0  37.42
2.5  Seg length ending at pt. 686 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  187.99  158.53  25.67
2.4  Seg length ending at pt. 1108 >= 6.0 stdevs above mean at 1.2212.  (no action taken)
     B1      X, Y, Z:  197.05  140.16  30.39
2.5  Seg length ending at pt. 1346 <= 0.1 at 0.0768.  (removed)
     A       X, Y, Z:  184.98  148.75  35.07
2.5  Seg length ending at pt. 1531 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  187.99  158.53  25.67
2.4  Seg length ending at pt. 1840 >= 6.0 stdevs above mean at 1.1298.  (no action taken)
     B1      X, Y, Z:  182.78  165.91  12.61
2.4  Seg length ending at pt. 2250 >= 6.0 stdevs above mean at 1.1884.  (no action taken)
     B1      X, Y, Z:  179.9  161.71  31.19
2.5  Seg length ending at pt. 2289 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  187.99  158.53  25.67
2.4  Seg length ending at pt. 2290 >= 6.0 stdevs above mean at 1.311.  (no action taken)
     B1      X, Y, Z:  188.38  158.21  24.46
2.1  Line 1 has 6 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  187.99  158.53  25.67
2.1  Line 1345 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  185.03  148.78  35.02
 
 


Number of type A irregularities = 5
Number of type B1 irregularities = 12
Number of type B2 irregularities = 0
Number of type C irregularities = 0
