# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN22_microglia11.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN22_microglia11.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  134.93  293.76  29.8
4.3  Radius of line 1609 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  134.93  293.76  29.8
4.3  Radius of line 2623 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  134.93  293.76  29.8
4.5  Radius of terminal line 2801 at 0.22 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  140.08  299.56  25.48
2.5  Seg length ending at pt. 4 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  134.93  293.76  29.8
2.4  Seg length ending at pt. 1387 >= 6.0 stdevs above mean at 1.2128.  (no action taken)
     B1      X, Y, Z:  127.42  288.82  34.28
2.4  Seg length ending at pt. 1443 >= 6.0 stdevs above mean at 1.0693.  (no action taken)
     B1      X, Y, Z:  135.09  294.06  31.23
2.5  Seg length ending at pt. 1609 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  134.93  293.76  29.8
2.4  Seg length ending at pt. 1610 >= 6.0 stdevs above mean at 1.7199.  (no action taken)
     B1      X, Y, Z:  134.93  293.31  28.14
2.4  Seg length ending at pt. 2217 >= 6.0 stdevs above mean at 1.073.  (no action taken)
     B1      X, Y, Z:  139.84  275.2  12.86
2.4  Seg length ending at pt. 2276 >= 6.0 stdevs above mean at 1.1594.  (no action taken)
     B1      X, Y, Z:  139.96  275.43  11.73
2.4  Seg length ending at pt. 2478 >= 6.0 stdevs above mean at 1.5156.  (no action taken)
     B1      X, Y, Z:  134.58  293.88  29.5
2.5  Seg length ending at pt. 2623 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  134.93  293.76  29.8
2.4  Seg length ending at pt. 2624 >= 6.0 stdevs above mean at 1.2564.  (no action taken)
     B1      X, Y, Z:  135.53  294.13  28.76
2.6  Line 2523 and line 2531 have the same coordinates.  Radii do not match.  (no action taken)
     B1      X, Y, Z:  125.34  296.2  35.88
2.1  Line 1 has 5 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  134.93  293.76  29.8
 
 


Number of type A irregularities = 3
Number of type B1 irregularities = 13
Number of type B2 irregularities = 0
Number of type C irregularities = 0
