# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN21_microglia3.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN21_microglia3.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  211.22  63.18  5.7
4.3  Radius of line 954 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  211.22  63.18  5.7
4.3  Radius of line 1339 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  211.22  63.18  5.7
4.3  Radius of line 1786 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  211.22  63.18  5.7
4.5  Radius of terminal line 1844 at 0.185 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  203.88  62.28  3.06
2.5  Seg length ending at pt. 4 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  211.22  63.18  5.7
2.4  Seg length ending at pt. 435 >= 6.0 stdevs above mean at 1.1436.  (no action taken)
     B1      X, Y, Z:  223.0  72.43  18.3
2.5  Seg length ending at pt. 954 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  211.22  63.18  5.7
2.5  Seg length ending at pt. 1339 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  211.22  63.18  5.7
2.5  Seg length ending at pt. 1786 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  211.22  63.18  5.7
2.1  Line 1 has 6 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  211.22  63.18  5.7
 
 


Number of type A irregularities = 4
Number of type B1 irregularities = 7
Number of type B2 irregularities = 0
Number of type C irregularities = 0
