# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN21_microglia18.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN21_microglia18.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 3.2 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  184.8  226.4  33.18
4.3  Radius of line 5 at 3.07 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  185.02  226.59  32.89
4.3  Radius of line 6 at 2.97 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  185.05  226.61  32.86
4.3  Radius of line 7 at 2.97 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  185.09  226.62  32.82
4.3  Radius of line 8 at 2.97 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  185.16  226.65  32.75
4.3  Radius of line 9 at 2.97 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  185.3  226.71  32.61
4.5  Radius of terminal line 2757 at 0.19 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  185.86  223.5  40.64
2.5  Seg length ending at pt. 6 <= 0.1 at 0.0469.  (removed)
     A       X, Y, Z:  185.05  226.61  32.86
2.4  Seg length ending at pt. 240 >= 6.0 stdevs above mean at 1.4045.  (no action taken)
     B1      X, Y, Z:  182.22  236.03  43.39
2.4  Seg length ending at pt. 361 >= 6.0 stdevs above mean at 1.1606.  (no action taken)
     B1      X, Y, Z:  183.22  241.03  31.75
2.5  Seg length ending at pt. 567 <= 0.1 at 0.0361.  (removed)
     A       X, Y, Z:  206.38  234.61  45.78
2.5  Seg length ending at pt. 743 <= 0.1 at 0.0837.  (removed)
     A       X, Y, Z:  197.94  229.03  40.82
2.4  Seg length ending at pt. 966 >= 6.0 stdevs above mean at 1.4802.  (no action taken)
     B1      X, Y, Z:  184.12  226.87  33.78
2.4  Seg length ending at pt. 1060 >= 6.0 stdevs above mean at 1.1836.  (no action taken)
     B1      X, Y, Z:  175.53  220.12  55.07
2.4  Seg length ending at pt. 1630 >= 6.0 stdevs above mean at 1.1819.  (no action taken)
     B1      X, Y, Z:  176.88  211.0  40.71
2.4  Seg length ending at pt. 1661 >= 6.0 stdevs above mean at 1.3113.  (no action taken)
     B1      X, Y, Z:  180.69  223.3  46.52
2.4  Seg length ending at pt. 2688 >= 6.0 stdevs above mean at 1.3952.  (no action taken)
     B1      X, Y, Z:  185.25  226.38  31.53
2.4  Seg length ending at pt. 2689 >= 6.0 stdevs above mean at 1.1758.  (no action taken)
     B1      X, Y, Z:  185.34  226.21  30.37
2.1  Line 1 has 3 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  184.63  226.15  33.43
2.1  Line 5 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  185.02  226.59  32.89
2.1  Line 742 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  197.88  229.0  40.77
 
 


Number of type A irregularities = 3
Number of type B1 irregularities = 18
Number of type B2 irregularities = 0
Number of type C irregularities = 0
