# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN20_microglia8.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN20_microglia8.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  177.99  90.68  23.1
4.3  Radius of line 5 at 3.19 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  178.15  90.1  23.05
4.3  Radius of line 6 at 3.07 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  178.18  89.88  22.89
4.3  Radius of line 7 at 3.07 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  178.22  89.65  22.75
4.3  Radius of line 8 at 2.975 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  178.25  89.29  22.33
4.3  Radius of line 1815 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  177.99  90.68  23.1
4.3  Radius of line 1816 at 3.095 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  178.5  91.06  23.07
4.3  Radius of line 1817 at 2.98 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  178.71  91.42  22.96
4.5  Radius of terminal line 3793 at 0.195 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  186.37  97.18  26.73
2.5  Seg length ending at pt. 4 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  177.99  90.68  23.1
2.4  Seg length ending at pt. 675 >= 6.0 stdevs above mean at 1.079.  (no action taken)
     B1      X, Y, Z:  171.93  73.93  6.76
2.4  Seg length ending at pt. 1222 >= 6.0 stdevs above mean at 1.728.  (no action taken)
     B1      X, Y, Z:  177.55  90.06  24.67
2.4  Seg length ending at pt. 1223 >= 6.0 stdevs above mean at 1.0579.  (no action taken)
     B1      X, Y, Z:  177.21  90.0  25.67
2.4  Seg length ending at pt. 1554 >= 6.0 stdevs above mean at 1.0847.  (no action taken)
     B1      X, Y, Z:  169.49  75.82  37.1
2.4  Seg length ending at pt. 1797 >= 6.0 stdevs above mean at 1.1589.  (no action taken)
     B1      X, Y, Z:  176.72  89.51  31.23
2.5  Seg length ending at pt. 1815 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  177.99  90.68  23.1
2.4  Seg length ending at pt. 3746 >= 6.0 stdevs above mean at 1.0775.  (no action taken)
     B1      X, Y, Z:  188.06  94.37  30.42
2.1  Line 1 has 4 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  177.99  90.68  23.1
 
 


Number of type A irregularities = 2
Number of type B1 irregularities = 16
Number of type B2 irregularities = 0
Number of type C irregularities = 0
