# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN20_microglia4.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN20_microglia4.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  34.92  99.48  47.82
4.3  Radius of line 5 at 3.21 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  34.86  99.85  47.38
4.3  Radius of line 6 at 3.11 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  34.85  100.21  47.1
4.3  Radius of line 1695 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  34.92  99.48  47.82
4.5  Radius of terminal line 2353 at 0.18 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  28.35  93.17  35.32
2.5  Seg length ending at pt. 4 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  34.92  99.48  47.82
2.5  Seg length ending at pt. 358 <= 0.1 at 0.0825.  (removed)
     A       X, Y, Z:  20.26  116.63  17.29
2.4  Seg length ending at pt. 990 >= 6.0 stdevs above mean at 1.149.  (no action taken)
     B1      X, Y, Z:  25.26  110.96  26.87
2.5  Seg length ending at pt. 1695 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  34.92  99.48  47.82
2.4  Seg length ending at pt. 1696 >= 6.0 stdevs above mean at 1.5579.  (no action taken)
     B1      X, Y, Z:  34.67  98.89  46.4
2.1  Line 1 has 4 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  34.92  99.48  47.82
2.1  Line 357 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  20.3  116.59  17.35
 
 


Number of type A irregularities = 3
Number of type B1 irregularities = 9
Number of type B2 irregularities = 0
Number of type C irregularities = 0
