# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN20_microglia25.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN20_microglia25.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  81.04  126.43  22.5
4.3  Radius of line 2 at 3.18 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  81.18  126.48  22.33
4.3  Radius of line 3 at 3.18 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  81.32  126.54  22.17
4.3  Radius of line 361 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  81.04  126.43  22.5
4.3  Radius of line 362 at 3.18 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  80.59  126.57  22.17
4.3  Radius of line 2713 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  81.04  126.43  22.5
4.5  Radius of terminal line 2852 at 0.255 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  81.31  121.03  15.64
2.5  Seg length ending at pt. 240 <= 0.1 at 0.03.  (removed)
     A       X, Y, Z:  90.14  135.53  15.09
2.4  Seg length ending at pt. 865 >= 6.0 stdevs above mean at 1.3409.  (no action taken)
     B1      X, Y, Z:  46.46  113.01  9.58
2.4  Seg length ending at pt. 1441 >= 6.0 stdevs above mean at 1.0575.  (no action taken)
     B1      X, Y, Z:  70.56  132.93  28.21
2.4  Seg length ending at pt. 2552 >= 6.0 stdevs above mean at 1.2173.  (no action taken)
     B1      X, Y, Z:  73.56  127.34  17.5
2.4  Seg length ending at pt. 2687 >= 6.0 stdevs above mean at 1.0577.  (no action taken)
     B1      X, Y, Z:  76.67  128.53  8.84
2.5  Seg length ending at pt. 2713 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  81.04  126.43  22.5
2.6  Line 1 and line 361 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  81.04  126.43  22.5
 
 


Number of type A irregularities = 2
Number of type B1 irregularities = 12
Number of type B2 irregularities = 0
Number of type C irregularities = 0
