# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN20_microglia17.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN20_microglia17.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  210.78  232.46  39.67
4.3  Radius of line 621 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  210.78  232.46  39.67
4.3  Radius of line 1818 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  210.78  232.46  39.67
4.3  Radius of line 2775 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  210.78  232.46  39.67
4.5  Radius of terminal line 2794 at 0.205 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  214.46  234.75  47.1
2.5  Seg length ending at pt. 4 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  210.78  232.46  39.67
2.4  Seg length ending at pt. 342 >= 6.0 stdevs above mean at 1.1546.  (no action taken)
     B1      X, Y, Z:  199.03  241.49  16.85
2.5  Seg length ending at pt. 621 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  210.78  232.46  39.67
2.4  Seg length ending at pt. 963 >= 6.0 stdevs above mean at 1.1196.  (no action taken)
     B1      X, Y, Z:  223.0  256.55  31.82
2.5  Seg length ending at pt. 1004 <= 0.1 at 0.0819.  (removed)
     A       X, Y, Z:  217.15  261.88  32.6
2.4  Seg length ending at pt. 1019 >= 6.0 stdevs above mean at 2.6693.  (no action taken)
     B1      X, Y, Z:  217.0  262.18  33.13
2.5  Seg length ending at pt. 1439 <= 0.1 at 0.0812.  (removed)
     A       X, Y, Z:  225.74  233.04  31.17
2.4  Seg length ending at pt. 1505 >= 6.0 stdevs above mean at 1.1201.  (no action taken)
     B1      X, Y, Z:  227.34  226.99  23.83
2.5  Seg length ending at pt. 1818 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  210.78  232.46  39.67
2.4  Seg length ending at pt. 2291 >= 6.0 stdevs above mean at 1.2087.  (no action taken)
     B1      X, Y, Z:  210.03  231.78  40.1
2.5  Seg length ending at pt. 2404 <= 0.1 at 0.0894.  (removed)
     A       X, Y, Z:  187.66  218.31  42.89
2.4  Seg length ending at pt. 2467 >= 6.0 stdevs above mean at 1.1355.  (no action taken)
     B1      X, Y, Z:  200.81  216.22  45.14
2.5  Seg length ending at pt. 2775 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  210.78  232.46  39.67
2.4  Seg length ending at pt. 2776 >= 6.0 stdevs above mean at 1.5049.  (no action taken)
     B1      X, Y, Z:  211.27  232.37  41.09
2.1  Line 1 has 6 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  210.78  232.46  39.67
2.1  Line 1438 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  225.69  233.09  31.21
 
 


Number of type A irregularities = 7
Number of type B1 irregularities = 14
Number of type B2 irregularities = 0
Number of type C irregularities = 0
