# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN1_microglia_9.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN1_microglia_9.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  197.8  220.9  33.77
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  197.8  220.9  33.77
4.5  Radius of terminal line 790 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  197.8  220.9  33.77
4.5  Radius of terminal line 1201 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  197.8  220.9  33.77
2.5  Seg length ending at pt. 584 <= 0.1 at 0.0583.  (removed)
     A       X, Y, Z:  196.4  220.69  40.92
2.4  Seg length ending at pt. 1202 >= 6.0 stdevs above mean at 1.2885.  (no action taken)
     B1      X, Y, Z:  198.09  220.5  34.96
2.4  Seg length ending at pt. 1392 >= 6.0 stdevs above mean at 1.1145.  (no action taken)
     B1      X, Y, Z:  212.5  226.59  45.15
2.7  Line 790 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  197.8  220.9  33.77
2.7  Line 1201 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  197.8  220.9  33.77
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  197.8  220.9  33.77
 
 


Number of type A irregularities = 3
Number of type B1 irregularities = 7
Number of type B2 irregularities = 0
Number of type C irregularities = 0
