# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN1_microglia_32.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN1_microglia_32.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  284.5  213.5  44.85
4.3  Radius of line 2 at 3.108 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  284.6  214.0  44.46
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  284.5  213.5  44.85
4.5  Radius of terminal line 367 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  284.5  213.5  44.85
4.5  Radius of terminal line 529 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  284.5  213.5  44.85
4.3  Radius of line 641 at 2.995 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  284.6  214.4  44.32
2.4  Seg length ending at pt. 990 >= 6.0 stdevs above mean at 1.2141.  (no action taken)
     B1      X, Y, Z:  277.89  229.4  15.68
2.4  Seg length ending at pt. 1192 >= 6.0 stdevs above mean at 1.1735.  (no action taken)
     B1      X, Y, Z:  268.8  222.59  13.77
2.7  Line 367 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  284.5  213.5  44.85
2.7  Line 529 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  284.5  213.5  44.85
2.6  Line 1 and line 3 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  284.5  213.5  44.85
2.6  Line 146 and line 156 have the same coordinates.  Radii do not match.  (no action taken)
     B1      X, Y, Z:  288.6  204.3  39.84
 
 


Number of type A irregularities = 2
Number of type B1 irregularities = 10
Number of type B2 irregularities = 0
Number of type C irregularities = 0
