# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN1_microglia_15.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN1_microglia_15.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  110.79  294.89  34.13
4.3  Radius of line 3 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  110.57  295.05  33.62
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  110.65  295.0  33.79
4.3  Radius of line 5 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  110.79  294.89  34.13
4.5  Radius of terminal line 458 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  110.79  294.89  34.13
2.4  Seg length ending at pt. 459 >= 6.0 stdevs above mean at 1.6255.  (no action taken)
     B1      X, Y, Z:  110.2  295.1  35.63
2.4  Seg length ending at pt. 671 >= 6.0 stdevs above mean at 1.9454.  (no action taken)
     B1      X, Y, Z:  110.09  295.19  35.5
2.7  Line 458 of rad 3.5 is an included side branch.  (removed)
     A      X, Y, Z:  110.79  294.89  34.13
2.6  Line 1 and line 5 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  110.79  294.89  34.13
2.6  Line 281 and line 353 have the same coordinates.  Radii do not match.  (no action taken)
     B1      X, Y, Z:  115.4  281.89  43.0
2.6  Line 333 and line 339 have the same coordinates.  Radii do not match.  (no action taken)
     B1      X, Y, Z:  116.79  281.1  46.64
2.6  Line 761 and line 768 have the same coordinates.  Radii do not match.  (no action taken)
     B1      X, Y, Z:  111.2  297.8  51.75
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 11
Number of type B2 irregularities = 0
Number of type C irregularities = 0
