# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN19_microglia25.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN19_microglia25.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  99.18  259.12  40.32
4.3  Radius of line 804 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  99.18  259.12  40.32
4.3  Radius of line 1462 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  99.18  259.12  40.32
4.3  Radius of line 1777 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  99.18  259.12  40.32
4.5  Radius of terminal line 1803 at 0.19 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  100.5  256.75  26.62
2.4  Seg length ending at pt. 1401 >= 6.0 stdevs above mean at 1.1959.  (no action taken)
     B1      X, Y, Z:  96.75  255.4  33.67
2.4  Seg length ending at pt. 1406 >= 6.0 stdevs above mean at 1.1554.  (no action taken)
     B1      X, Y, Z:  99.4  257.66  37.49
2.4  Seg length ending at pt. 1456 >= 6.0 stdevs above mean at 1.22.  (no action taken)
     B1      X, Y, Z:  99.09  257.7  33.77
2.5  Seg length ending at pt. 1777 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  99.18  259.12  40.32
2.6  Line 1 and line 804 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  99.18  259.12  40.32
2.6  Line 1 and line 1462 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  99.18  259.12  40.32
2.6  Line 804 and line 1462 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  99.18  259.12  40.32
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 11
Number of type B2 irregularities = 0
Number of type C irregularities = 0
