# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN19_microglia2.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN19_microglia2.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  193.37  229.09  17.91
4.3  Radius of line 357 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  193.37  229.09  17.91
4.3  Radius of line 1679 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  193.37  229.09  17.91
4.5  Radius of terminal line 1957 at 0.2 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  201.86  235.31  16.42
2.4  Seg length ending at pt. 358 >= 6.0 stdevs above mean at 1.1526.  (no action taken)
     B1      X, Y, Z:  194.19  228.81  18.67
2.4  Seg length ending at pt. 1007 >= 6.0 stdevs above mean at 1.0436.  (no action taken)
     B1      X, Y, Z:  194.83  228.66  26.23
2.4  Seg length ending at pt. 1330 >= 6.0 stdevs above mean at 1.0592.  (no action taken)
     B1      X, Y, Z:  194.9  228.78  27.28
2.5  Seg length ending at pt. 1679 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  193.37  229.09  17.91
2.4  Seg length ending at pt. 1795 >= 6.0 stdevs above mean at 1.2536.  (no action taken)
     B1      X, Y, Z:  198.4  237.74  19.3
2.6  Line 1 and line 357 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  193.37  229.09  17.91
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 9
Number of type B2 irregularities = 0
Number of type C irregularities = 0
