# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN19_microglia19.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN19_microglia19.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  168.34  13.94  62.96
4.3  Radius of line 1172 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  168.34  13.94  62.96
4.3  Radius of line 1560 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  168.34  13.94  62.96
4.5  Radius of terminal line 2430 at 0.155 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  185.18  15.28  61.85
2.4  Seg length ending at pt. 173 >= 6.0 stdevs above mean at 1.089.  (no action taken)
     B1      X, Y, Z:  146.55  9.66  54.67
2.4  Seg length ending at pt. 848 >= 6.0 stdevs above mean at 1.0742.  (no action taken)
     B1      X, Y, Z:  164.75  20.82  49.78
2.5  Seg length ending at pt. 1560 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  168.34  13.94  62.96
2.4  Seg length ending at pt. 1561 >= 6.0 stdevs above mean at 1.2912.  (no action taken)
     B1      X, Y, Z:  168.56  14.44  61.79
2.6  Line 1 and line 1172 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  168.34  13.94  62.96
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 8
Number of type B2 irregularities = 0
Number of type C irregularities = 0
