# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN19_microglia17.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN19_microglia17.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
2.2  Line 1 is of type 3.  (no action taken)
     B1      X, Y, Z:  63.52  250.43  52.79
4.3  Radius of line 935 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  63.52  250.43  52.79
4.3  Radius of line 1321 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  63.52  250.43  52.79
4.3  Radius of line 1726 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  63.52  250.43  52.79
4.5  Radius of terminal line 2093 at 0.175 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  70.42  251.65  38.42
2.5  Seg length ending at pt. 2 <= 0.1 at 0.0616.  (removed)
     A       X, Y, Z:  63.47  250.46  52.81
2.4  Seg length ending at pt. 454 >= 6.0 stdevs above mean at 1.0581.  (no action taken)
     B1      X, Y, Z:  48.75  254.03  57.22
2.4  Seg length ending at pt. 780 >= 6.0 stdevs above mean at 1.1276.  (no action taken)
     B1      X, Y, Z:  45.22  253.08  44.78
2.5  Seg length ending at pt. 1321 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  63.52  250.43  52.79
2.4  Seg length ending at pt. 1365 >= 6.0 stdevs above mean at 1.3687.  (no action taken)
     B1      X, Y, Z:  62.67  249.08  62.36
2.4  Seg length ending at pt. 1370 >= 6.0 stdevs above mean at 1.3774.  (no action taken)
     B1      X, Y, Z:  62.96  249.96  52.28
2.5  Seg length ending at pt. 1726 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  63.52  250.43  52.79
2.4  Seg length ending at pt. 1899 >= 6.0 stdevs above mean at 1.1006.  (no action taken)
     B1      X, Y, Z:  74.54  266.37  44.81
2.6  Line 1 and line 935 have the same coordinates.  Parents do not match.  (no action taken)
     B1      X, Y, Z:  63.52  250.43  52.79
2.1  Line 1 has 3 daughters.  Type is 3.  (no action taken)
     B1      X, Y, Z:  63.52  250.43  52.79
 
 


Number of type A irregularities = 3
Number of type B1 irregularities = 12
Number of type B2 irregularities = 0
Number of type C irregularities = 0
