# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN18_microglia5.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN18_microglia5.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  94.09  225.27  15.77
4.3  Radius of line 821 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  94.09  225.27  15.77
4.3  Radius of line 1584 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  94.09  225.27  15.77
4.3  Radius of line 2949 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  94.09  225.27  15.77
4.5  Radius of terminal line 3478 at 0.21 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  94.9  222.9  8.44
2.5  Seg length ending at pt. 4 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  94.09  225.27  15.77
2.5  Seg length ending at pt. 821 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  94.09  225.27  15.77
2.5  Seg length ending at pt. 1584 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  94.09  225.27  15.77
2.4  Seg length ending at pt. 1857 >= 6.0 stdevs above mean at 1.1858.  (no action taken)
     B1      X, Y, Z:  94.31  226.43  16.28
2.4  Seg length ending at pt. 2237 >= 6.0 stdevs above mean at 1.2696.  (no action taken)
     B1      X, Y, Z:  94.15  224.56  26.28
2.4  Seg length ending at pt. 2604 >= 6.0 stdevs above mean at 1.1833.  (no action taken)
     B1      X, Y, Z:  92.87  227.19  31.41
2.4  Seg length ending at pt. 2744 >= 6.0 stdevs above mean at 1.1623.  (no action taken)
     B1      X, Y, Z:  89.0  224.16  42.42
2.5  Seg length ending at pt. 2949 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  94.09  225.27  15.77
2.4  Seg length ending at pt. 2950 >= 6.0 stdevs above mean at 1.2588.  (no action taken)
     B1      X, Y, Z:  94.43  225.8  14.68
2.4  Seg length ending at pt. 3323 >= 6.0 stdevs above mean at 1.1234.  (no action taken)
     B1      X, Y, Z:  98.53  224.43  8.82
2.1  Line 1 has 6 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  94.09  225.27  15.77
 
 


Number of type A irregularities = 4
Number of type B1 irregularities = 12
Number of type B2 irregularities = 0
Number of type C irregularities = 0
