# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN18_microglia3.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN18_microglia3.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  173.55  42.31  24.73
4.3  Radius of line 1371 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  173.55  42.31  24.73
4.3  Radius of line 2378 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  173.55  42.31  24.73
4.3  Radius of line 3701 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  173.55  42.31  24.73
4.5  Radius of terminal line 3846 at 0.195 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  174.31  51.32  16.39
2.5  Seg length ending at pt. 4 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  173.55  42.31  24.73
2.4  Seg length ending at pt. 679 >= 6.0 stdevs above mean at 1.0769.  (no action taken)
     B1      X, Y, Z:  174.68  61.77  32.07
2.4  Seg length ending at pt. 891 >= 6.0 stdevs above mean at 1.1131.  (no action taken)
     B1      X, Y, Z:  168.84  57.92  40.24
2.4  Seg length ending at pt. 967 >= 6.0 stdevs above mean at 1.1494.  (no action taken)
     B1      X, Y, Z:  173.4  53.68  38.18
2.5  Seg length ending at pt. 1371 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  173.55  42.31  24.73
2.4  Seg length ending at pt. 1372 >= 6.0 stdevs above mean at 1.3212.  (no action taken)
     B1      X, Y, Z:  173.47  41.63  23.6
2.4  Seg length ending at pt. 2219 >= 6.0 stdevs above mean at 1.9541.  (no action taken)
     B1      X, Y, Z:  174.03  41.88  25.05
2.4  Seg length ending at pt. 2350 >= 6.0 stdevs above mean at 1.2962.  (no action taken)
     B1      X, Y, Z:  174.19  42.1  24.57
2.5  Seg length ending at pt. 2378 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  173.55  42.31  24.73
2.4  Seg length ending at pt. 2518 >= 6.0 stdevs above mean at 1.0621.  (no action taken)
     B1      X, Y, Z:  173.93  21.62  25.01
2.5  Seg length ending at pt. 3701 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  173.55  42.31  24.73
2.1  Line 1 has 6 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  173.55  42.31  24.73
 
 


Number of type A irregularities = 4
Number of type B1 irregularities = 13
Number of type B2 irregularities = 0
Number of type C irregularities = 0
