# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN18_microglia12.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN18_microglia12.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 3.245 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  40.11  138.4  35.43
4.3  Radius of line 5 at 3.135 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  40.34  138.18  35.39
4.3  Radius of line 6 at 3.045 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  40.46  138.06  35.43
4.3  Radius of line 7 at 3.045 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  40.59  137.96  35.46
4.3  Radius of line 8 at 2.965 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  40.78  137.68  35.6
4.5  Radius of terminal line 2825 at 0.19 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  37.03  144.9  29.75
2.4  Seg length ending at pt. 691 >= 6.0 stdevs above mean at 1.0132.  (no action taken)
     B1      X, Y, Z:  23.51  141.75  14.66
2.4  Seg length ending at pt. 1418 >= 6.0 stdevs above mean at 1.0273.  (no action taken)
     B1      X, Y, Z:  18.46  130.24  19.01
2.5  Seg length ending at pt. 2557 <= 0.1 at 0.0574.  (removed)
     A       X, Y, Z:  52.86  127.29  36.02
2.4  Seg length ending at pt. 2742 >= 6.0 stdevs above mean at 0.9782.  (no action taken)
     B1      X, Y, Z:  40.38  139.22  31.89
2.6  Line 2276 and line 2344 have the same coordinates.  Radii do not match.  (no action taken)
     B1      X, Y, Z:  62.57  148.58  36.09
2.1  Line 1 has 3 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  39.99  138.65  35.5
 
 


Number of type A irregularities = 1
Number of type B1 irregularities = 11
Number of type B2 irregularities = 0
Number of type C irregularities = 0
