# Standardization file for C:\NMO_dev\data_proc\Temp_LMeasure\PVN18_microglia11.swc.swc created with StdSwc version 1.31 on 10/13/20.
# Edited SWC file saved as C:\NMO_dev\data_proc\Temp_LMeasure\PVN18_microglia11.swc.swc.CNG.swc.  See StdSwc1.31.doc for more information.
#
# code   irregularity_description. (action taken)
#     irregularity_type     coordinates
#
4.3  Radius of line 4 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  32.14  178.06  25.41
4.3  Radius of line 5 at 3.16 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  31.89  177.9  25.1
4.3  Radius of line 6 at 3.02 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  31.62  177.62  24.92
4.3  Radius of line 7 at 2.915 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  31.35  177.3  24.89
4.3  Radius of line 8 at 2.83 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  31.08  177.02  24.98
4.3  Radius of line 922 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  32.14  178.06  25.41
4.3  Radius of line 923 at 3.115 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  32.74  177.87  25.12
4.3  Radius of line 924 at 2.995 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  33.17  177.68  25.03
4.3  Radius of line 925 at 2.915 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  33.52  177.55  25.12
4.3  Radius of line 926 at 2.855 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  33.82  177.52  25.3
4.3  Radius of line 927 at 2.8 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  34.09  177.62  25.5
4.3  Radius of line 3255 at 3.5 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  32.14  178.06  25.41
4.3  Radius of line 3256 at 2.87 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  31.6  178.83  25.71
4.5  Radius of terminal line 3505 at 0.18 >= 5.0 stdevs above the mean.  (no action taken)
     B1      X, Y, Z:  28.6  178.87  39.15
2.5  Seg length ending at pt. 4 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  32.14  178.06  25.41
2.4  Seg length ending at pt. 442 >= 6.0 stdevs above mean at 1.107.  (no action taken)
     B1      X, Y, Z:  22.03  177.49  18.76
2.4  Seg length ending at pt. 490 >= 6.0 stdevs above mean at 1.0325.  (no action taken)
     B1      X, Y, Z:  31.96  178.93  10.07
2.5  Seg length ending at pt. 922 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  32.14  178.06  25.41
2.4  Seg length ending at pt. 1291 >= 6.0 stdevs above mean at 1.2001.  (no action taken)
     B1      X, Y, Z:  40.43  194.87  36.42
2.5  Seg length ending at pt. 1423 <= 0.1 at 0.0927.  (removed)
     A       X, Y, Z:  45.03  198.53  27.12
2.4  Seg length ending at pt. 2301 >= 6.0 stdevs above mean at 1.0546.  (no action taken)
     B1      X, Y, Z:  51.7  160.93  37.03
2.4  Seg length ending at pt. 2657 >= 6.0 stdevs above mean at 1.1769.  (no action taken)
     B1      X, Y, Z:  57.5  182.63  30.82
2.4  Seg length ending at pt. 3134 >= 6.0 stdevs above mean at 1.0816.  (no action taken)
     B1      X, Y, Z:  47.03  180.96  15.83
2.5  Seg length ending at pt. 3255 <= 0.1 at 0.  (removed)
     A       X, Y, Z:  32.14  178.06  25.41
2.1  Line 1 has 5 daughters.  Type is 1.  (no action taken)
     B1      X, Y, Z:  32.14  178.06  25.41
 
 


Number of type A irregularities = 4
Number of type B1 irregularities = 21
Number of type B2 irregularities = 0
Number of type C irregularities = 0
